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How does QuickBooks sync work?

Last updated 2026-04-28

Connect TradelyHQ to your QuickBooks Online account once, and your invoices and payments stay matched up in both places. If you're still deciding how QuickBooks fits your shop, the QuickBooks for contractors page walks through the whole workflow.

Connecting QuickBooks

  1. In TradelyHQ, go to Settings → Business → Integrations
  2. Find the QuickBooks Online card and click Connect QuickBooks
  3. Sign in as a QuickBooks company admin, choose the correct company, and approve TradelyHQ when prompted
  4. You'll land back in TradelyHQ. The QuickBooks card shows Connected and a company ID you can use to confirm your selection

What happens after you're connected

The sync runs both ways. Invoices you send go into QuickBooks, and payments, refunds, and paid status come back the other way, so your books and your job board agree without anyone re-typing anything. A nightly check sweeps for anything a notification missed.

One thing to know: payments TradelyHQ records in QuickBooks land in Undeposited Funds, the same holding spot QuickBooks uses for checks you haven't taken to the bank yet. You group them into bank deposits inside QuickBooks the same way you always have. That's expected, not a bug.

Refunds work both ways too. A refund your bookkeeper enters in QuickBooks flows back and updates the invoice in TradelyHQ. And a refund you issue through TradelyHQ copies to QuickBooks as a refund receipt. That copy needs two settings filled in first, both under Settings, Business, Integrations. Point the Refunds item mapping at an active refunds item in QuickBooks (ask your bookkeeper; it is usually called Refunds and allowances). Then pick the refund deposit account, which is the QuickBooks account the refund money comes out of. There is no default for that account on purpose, because guessing it would put the money in the wrong place on your books. If either one is missing, the refund copy stops and shows in the Sync Errors panel until you set it.

If anything doesn't match between TradelyHQ and QuickBooks, you'll see it in the QuickBooks Sync Errors panel.

How to disconnect

Go to Settings → Business → Integrations, find the QuickBooks Online card, and click Disconnect. Confirm in the popup. Done. Anything you've already pushed stays in QuickBooks exactly as it was.

If something looks wrong

The always-visible Books out of sync section compares the last checked invoice status and amount in TradelyHQ and QuickBooks, and flags an invoice found on only one side. Acknowledge marks the difference as reviewed; it does not change either invoice. Correct the wrong record, then let the next check confirm both sides agree.

Open the QuickBooks Sync Errors panel under Settings → Business → Integrations. Dismiss hides a message after you've reviewed it; it does not retry the sync. Check QuickBooks refreshes payment and balance changes for invoices and payments that are already linked. It does not retry a failed initial invoice copy; fix the cause and use Copy to QuickBooks from that invoice.

If you see a Reconnect QuickBooks banner at the top of the Sync Errors panel, click it and sign in again. Your existing invoices aren't affected.

Still stuck? Ask for a demo →